Bioinformatics and Computational Biology Faculty: Hunter Moseley, Jin Chen, JC Jeong, Mark Ebbert, Sally Ellingson, V K Cody Bumgardner

McKinnon LM, Miller JB, Whiting MF, Kauwe JSK, Ridge PG

A comprehensive analysis of the phylogenetic signal in ramp sequences in 211 vertebrates

Sci Rep

Ellingson SR, Davis B, Allen J

Machine learning and ligand binding predictions: A review of data, methods, and obstacles

Biochimica et biophysica acta. General subjects

Jin H, Mitchell JM, Moseley HNB

Atom Identifiers Generated by a Neighborhood-Specific Graph Coloring Method Enable Compound Harmonization across Metabolic Databases

Metabolites

Yao S, Moseley HNB

A chemical interpretation of protein electron density maps in the worldwide protein data bank

PloS one

Hinderer EW, Moseley HNB

GOcats: A tool for categorizing Gene Ontology into subgraphs of user-defined concepts

PloS one

Powell CD, Kirchoff DC, DeRouchey JE, Moseley HNB

Entropy based analysis of vertebrate sperm protamines sequences: evidence of potential dityrosine and cysteine-tyrosine cross-linking in sperm protamines

BMC genomics

Jin H, Moseley HNB

Robust Moiety Model Selection Using Mass Spectrometry Measured Isotopologues

Metabolites

Mitchell JM, Flight RM, Moseley HNB

Deriving Lipid Classification Based on Molecular Formulas

Metabolites

Liu S, Liu J, Xie Y, Zhai T, Hinderer EW, Stromberg AJ, Vanderford NL, Kolesar JM, Moseley HNB, Chen L, Liu C, Wang C

MEScan: a powerful statistical framework for Genome-Scale mutual exclusivity analysis of cancer mutations

Bioinformatics (Oxford, England)

Zhong Y, Mohan K, Liu J, Al-Attar A, Lin P, Flight RM, Sun Q, Warmoes MO, Deshpande RR, Liu H, Jung KS, Mitov MI, Lin N, Butterfield DA, Lu S, Liu J, Moseley HNB, Fan TWM, Kleinman ME, Wang QJ

Loss of CLN3, the gene mutated in juvenile neuronal ceroid lipofuscinosis, leads to metabolic impairment and autophagy induction in retinal pigment epithelium

Biochimica et biophysica acta. Molecular basis of disease